PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525554.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 168aa    MW: 18319.6 Da    PI: 5.2885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-193483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     +kGVr++  +g+WvAeIr p   + r +r +lg+f+ta eAa a++aa++kl+g
  XP_023525554.1 34 TFKGVRQRT-WGKWVAEIRQP---N-RgARLWLGTFDTAHEAAVAYDAAARKLYG 83
                    69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
METKPRKPTT NVAQASSRKG CMRGKGGPDN ASCTFKGVRQ RTWGKWVAEI RQPNRGARLW  60
LGTFDTAHEA AVAYDAAARK LYGSDAKLNL PQTASEPQQS APTVAMPSAS PPVAEMEPVG  120
GLWGSEDVNF DESIWREAVM SLDFPMIGDD EGFYFDGVGG RDAMQWCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-46ERF family protein