PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525576.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 227aa    MW: 24934.8 Da    PI: 4.9317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-182272155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  XP_023525576.1 22 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 72
                    59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVKKSEKTAA ESFPVAAPSC KKKYKGVRMR SWGSWVSEIR APNQKTRIWL GSYSTAEAAA  60
RAYDAALLCL KGASASLNFP EIANSIPISD HCHFRRLHHH IDSSDADIMS PKSIQRVAAA  120
AANGFRENVS SAVVTSPPSP AVSSPSHSSD LPDDEASVTV SSDGVYDQID PSTAEMDSWC  180
NYFDTLQSPK FIDQMLTEAW FDFGSIPAAE IPDFYEEETD IRLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-34ERF family protein