PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525604.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB
Protein Properties Length: 297aa    MW: 32952.4 Da    PI: 4.696
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525604.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.5e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEd++l++++   G g+W++ ++  g+ R++k+c++rw +yl
   XP_023525604.1 14 KGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding54.62.5e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ Tt+E+ l+++++  lG++ W++Ia++++ gRt++++k++w+++l
   XP_023525604.1  67 RGNITTDEENLIIKLHSTLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGRRPCCEKV GLKKGRWTAE EDDRLKKYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRCDLVRGNI TTDEENLIIK LHSTLGNRWS LIASHLPGRT DNEIKNYWNS HLSRQIHTIR  120
RRSGNDDGSV IVDVARLSLP PRRKGSRGRR SKEAALAVET ETETETAARE KTVYGAVDDP  180
AEERVSSNDK VISKTTDVGG SATLSFDKDD MSLDLDAFLD WDNDNDDDDD DGNKVTAGTG  240
GAEVETGGEC SSISCSFRLD SPWNWESFVG GEEWEAGEDL PAAAVIESDD VISWLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.13e-70MYB family protein