PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525758.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 163aa    MW: 18688 Da    PI: 6.1201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+ps    ++r++lg+f tae+Aa+a+++a++ + 
  XP_023525758.1  7 QYRGVRQRH-WGSWVSEIRHPSL---KTRIWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********944...5**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MARPQRQYRG VRQRHWGSWV SEIRHPSLKT RIWLGTFETA EDAARAYDEA ARLMCGPNAR  60
TNFPYNPNTI QSSNSKILSA NLTAKLHKCY MASSQISNQE FKRELPPPFV AASYADAARS  120
MVEENRPTAA EAAEQEELKL LEDDHIEQMI EELLYYGSME FCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-55ERF family protein