PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023525775.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 356aa MW: 39281.8 Da PI: 8.2836

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023525775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.5e-56	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_023525775.1 15 LPPGFRFHPTDEELITYYLLKKVLDSTFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSA 108 79***********************999.89***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_023525775.1 109 kTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 55677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDVSPFSHYD DSHHLPPGFR FHPTDEELIT YYLLKKVLDS TFTGRAIAEV DLNKCEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSAKT YSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGNFAYHY LSRTSKDEWV ISRVFQKSGA GGGGGGATSS 180 NGGGSKKARF VPGSVNVYPE PSSPSSVSLP PLLDSSLYSA PATISTASGN IPDRDSRSYN 240 SPAAREHVSC FSTTAGGSLN IPNYDFAPLP PLAAADPSTR FHRNIGLSAF PSLRSLQENL 300 QLPFFYSPAN LPSTTAVHHG NISSADIGAC SSAGNWAVSD ETRFMNSTEL DCMWSY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDVSPFSHYD DSHHLPPGFR FHPTDEELIT YYLLKKVLDS TFTGRAIAEV DLNKCEPWEL  60
PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSAKT YSLVGMKKTL  120
VFYRGRAPKG EKSNWVMHEY RLEGNFAYHY LSRTSKDEWV ISRVFQKSGA GGGGGGATSS  180
NGGGSKKARF VPGSVNVYPE PSSPSSVSLP PLLDSSLYSA PATISTASGN IPDRDSRSYN  240
SPAAREHVSC FSTTAGGSLN IPNYDFAPLP PLAAADPSTR FHRNIGLSAF PSLRSLQENL  300
QLPFFYSPAN LPSTTAVHHG NISSADIGAC SSAGNWAVSD ETRFMNSTEL DCMWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-103	NAC family protein