PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525813.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 176aa    MW: 19636.2 Da    PI: 5.7416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-181565155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a+  ++g
  XP_023525813.1 15 SIYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAAYHFRG 65
                    57*****999.**********8...557**********************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGEPSSMGRH GAATSIYRGV RKRKWGKWVS EIREPGKKTR IWLGSFETPE MAAAAYDVAA  60
YHFRGRDARL NFPNLVDSLP LPLGSSSDDI RLAAHEGALR LRTTPTVVPE RSGTSGLGLA  120
PVTVRLSPSQ IQAINESPLD SPKMWMQMSS ESLVMEEYSN EDEMWENMQN DSLWDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.19e-49ERF family protein