PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023525824.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 278aa    MW: 30854.1 Da    PI: 9.8732
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023525824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-14556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_023525824.1  5 KQKWTQEEEEALLAGVQKHGPGKWKNILKDPEfapflTHRSNIDLKDKWRNL 56
                     79************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKQKWTQ EEEEALLAGV QKHGPGKWKN ILKDPEFAPF LTHRSNIDLK DKWRNLSVST  60
ASQGSKEKSR TPKAKAIVAA SVSNNQNSAL TKFNASADAA GEDPPNSAPQ DGKNVPRYHT  120
MIFEALSTIK DSNGCDIGTI VNFIEQRHEV PQNFRRQLSS KLRRLVSQGK LEKIQNCYKV  180
KKDNSLAVKT PTPKQKDVRQ RMSQYTMGGL MPSGETVEDA AKAAAYKVAD AENKSFLAAE  240
AVKEAERIAK MAEDTDSMLQ IIKEMYEKCS RGEIVLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.22e-76MYB_related family protein