PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526123.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 227aa MW: 26048.7 Da PI: 6.6729

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.2	5.1e-27	62	150	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ + ++s+++g+i r++ C+keg+ + + k r++r++tr gCka+++vk +k+gkw++tk+++eHnH+l+ XP_023526123.1 62 FYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLV 150 9************************************999999989*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDLRDNSERC VLTVDADAGE EGIEGGSFES PAGTELIEGD GDIILEPYEG MEFESEDAAK 60 IFYDKYARQV GFVMRVMSCR RSEKDGRILA RRLGCNKEGY CVSIRGKFGA VRKPRPSTRE 120 GCKAMIHVKY DKSGKWVITK FVKEHNHPLV VSPREARQTM DEKDKQIQEL TIELRNKKRL 180 CSTYQEQLAA FMKIVEEHTD QLSRKVQNVV TNLKEFESIE QELLHPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-114	FAR1 family protein