PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526170.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 216aa    MW: 24048.5 Da    PI: 8.4995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10140187455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L+ l+P +    +k +  a++L ++++Y++sLq
  XP_023526170.1 140 SHSLAERVRREKINNKLKCLQNLIPGC----HKSMGMAMVLDETINYVHSLQ 187
                     8*************************9....788*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSEFRQDLHQ ERGLNIEVLT QFSNMTESML EGGLENLLGY HFQLPESTTP SSLSNFPCVT  60
LLKCQNEFPI TRTGLLVDNA QETMKRKAKQ ESESNSGALC AARPLKNLGG GRKRRNCEKE  120
QEKPAEVVHV RAKRGQATDS HSLAERVRRE KINNKLKCLQ NLIPGCHKSM GMAMVLDETI  180
NYVHSLQNQV EFLSMELAAA CSSLGINFGT GAIRKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-42bHLH family protein