PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526322.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 360aa    MW: 39035.1 Da    PI: 9.5146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.5e-13287332655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  XP_023526322.1 287 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 332
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGSNTHHSFQ QPNSALLRFR SAPSSLLADY AQGIDSKRSN PFESSESERM VSRFGSRNDS  60
ESPAAGNYCS GLPPHYPRPS TAVNCSSSSS SSSSSSSSSS SSSSSSSSSM SSSLGFLGSN  120
LVRQSSSPAG VFSQLNQNGY GGGSFNRLSG SNNNGGGELS FSSLLPSSLG MLSHISEQVI  180
GNEKLTNTNG EPQFFTPTGF PFASWNESSQ FSEPFPVVKH DPDSNRKLFS SSHQNGEIGN  240
RVHLLSHHLS LPKNTSDIPS IEKLLQLQDA VPCRIRAKRG CATHPRSIAE RVRRTRISER  300
MRKLQDLVPN MDKQTNTADM LDLAVDYIKE LQRQFKTLSD NRANCVCVNT QKAVSNQIIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-83bHLH family protein