PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526564.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 300aa    MW: 34138.7 Da    PI: 4.8782
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-1965113355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_023526564.1  65 YRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNTAEEAARAYDREARKIRG 113
                     9*******.**********954...3************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MCGGAFIAGF IPRRDGQRVT ASDIWPNSPL FDFNKCPPDH DASPVKRPLR SSDEKPKKRQ  60
RKNLYRGIRQ RPWGKWAAEI RDPRKGIRVW LGTFNTAEEA ARAYDREARK IRGKKAKVNF  120
PNEDDEFSIQ ARCNLQNANP QFHTQIRANN LHSVPENSVY GEFCWDRNQI GNFMAKDFNG  180
SRIPPVIEEQ SASGSENSYS PPERSDVYQN INAVEFGVEE AEEKPEEKVA IVATTEEENE  240
VQKLSEELMA YENFMKFYQI PYLDGQSTVT NPAEEQVVGD LWSFDDDDGG LHGSVSSNDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-32ERF family protein