PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526721.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 185aa    MW: 20281 Da    PI: 7.5713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-2070120155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa a+++a+ +++g
  XP_023526721.1  70 TKYRGIRQRP-WGKWAAEIRDPQ----KgLRVWLGTYNTAEEAAIAYDQAAVRIRG 120
                     69********.**********94....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MCGGAIISDP VVDTTFSDLL GLDHNLSANS SHPSQVKIES PDGCEEAPAA AAAAEGLAGE  60
VKKPKKIRKT KYRGIRQRPW GKWAAEIRDP QKGLRVWLGT YNTAEEAAIA YDQAAVRIRG  120
KKAKLNFTHP PPPPPPPPQQ HLPPNNIQPT LESILGLYPS PPVEPSADPW WVDDLLIYQQ  180
QNFQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-24ERF family protein