PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526745.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 182aa    MW: 19663.2 Da    PI: 10.2626
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-057597123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_023526745.1 75 YTCNFCKREFRSAQALGGHMNVH 97
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MERNCLRTAC RTSLTTMNTT ISSGGGAAAT AGGGGGGGGG GPNGVGKSQR NKVCRAAAAA  60
EEDFINGISW PPRSYTCNFC KREFRSAQAL GGHMNVHRRD RALLYSPPAD HTHFTNLNLN  120
LHHNPFPNRP FKALEIAKPN RNKPHKFIGL DIEISTTNNT ATLLTESKKK DIDLELRLGY  180
ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.11e-22C2H2 family protein