PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526750.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 299aa MW: 33743.7 Da PI: 5.9364

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell++++k+ g+ +W++ ++ g+ R++k+c++rw +yl XP_023526750.1 14 KGPWTSEEDELLINYIKKNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62 79**************98888******99**********97 PP
2	Myb_DNA-binding	50.6	4.4e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_023526750.1 68 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGRTPCCDKK GLKKGPWTSE EDELLINYIK KNNGHGSWRS LPKLAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTPEEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLLCI 120 GIDPQTHEPF NSRCSSSTAP ASPTTRHMAQ WESARLEAEA RLSRESSLFT PLPMETTTDS 180 DFFLQIWNSE VGDSFRKCRE DKTTCHSQSS LSSSIKCESV YIVATHNGVD YTGSSAMESN 240 ENEETEYKNF KSMADIVMSK SDSSSANEFE ESSDSALELL LDFPINNDMS FLEENNTNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-108	MYB family protein