PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526791.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 237aa MW: 26952.5 Da PI: 9.4332

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.5	1.4e-49	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL kk+ +++l++ vi+++d+++++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg d++++s+ XP_023526791.1 14 LPPGFRFHPTDEELILQYLIKKALSSPLPA-AVIPDADVCRFDPWDLPGD---LERERYFFSTRQAKYSNGRRTNRATGSGYWKATGIDRRIVSS 104 79**************************.89***********44...46899******************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvglkktLvfy+g+ p+g +tdWvmheyrl XP_023526791.1 105 kENRLVGLKKTLVFYTGNPPNGLRTDWVMHEYRL 138 67778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MENLTFLKNG VLRLPPGFRF HPTDEELILQ YLIKKALSSP LPAAVIPDAD VCRFDPWDLP 60 GDLERERYFF STRQAKYSNG RRTNRATGSG YWKATGIDRR IVSSKENRLV GLKKTLVFYT 120 GNPPNGLRTD WVMHEYRLVG DSEAPPSAIN GELPTLNHNW VLCRIFLKKS TKNRDEKKKI 180 CTPVFHQFLR TDLNLAAPCS SSSGSSGVTE ISVNSHQEQE QEQEETSSCH SLRNRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-86	NAC family protein