PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526805.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 284aa    MW: 32379.2 Da    PI: 6.2682
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-1990139255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r +r++lg+++taeeAa  +++a+ +l+g
  XP_023526805.1  90 KFRGVRRRP-WGKWAAEIRDPL----RrTRVWLGTYDTAEEAAVVYDRAAVRLRG 139
                     89*******.**********73....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRVCSAGIK FREVRTITDK PATETKLVRI TYTDGDATDS SSGEDEEPSL IRHVKRHVTE  60
IRLLTTDCSK KPLPPKSRVK PPSNSESHRK FRGVRRRPWG KWAAEIRDPL RRTRVWLGTY  120
DTAEEAAVVY DRAAVRLRGP NALTNFVAEA PTSKTTVVTY LPPPSPPPPP ENHSTAAVGV  180
SYSKESRNHC SPTSVLRLEE QNWRPIEHLS EESGLEEEFN WLYDRNSNSF LFNLRSPQPL  240
FSDQMELEIP KWEDFGDISV DFDSCKWDVE NYFQDPSFSI ALTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-42ERF family protein