PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526935.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 237aa    MW: 26212.2 Da    PI: 9.3791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.3e-202575256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+ +l+ge
  XP_023526935.1 25 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAAIALRGE 75
                    589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MPAGREPKRS AALSRCQPTK SPARRFVGVR QRPSGRWVAE IKDSSQRVRL WLGTYDTPEE  60
AARAYDEAAI ALRGENTRTN FVSPAIGRSS EQKIPDIGVL KAKLSNITAR TNEQSKSLKN  120
RVSDRFTFGN IFNFRSYQPV TMADFTAVDK VAVQPTIIVP HVETDQPCSW DGSSGDGDGF  180
QRLGFSSDAS EGGGEWWVDQ ILGDDYRNED LKSKRLRVSS SVVVPPTFSG SPSYGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18ERF family protein