PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527107.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 495aa MW: 55393.2 Da PI: 7.5552

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.8	1.1e-09	291	328	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LAk++gL+ +qV++WF N R + XP_023527107.1 291 FEHflHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVR 328 554459******************************88 PP
2	BELL	80.6	2.2e-26	182	245	9	72
BELL 9 kakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 k+ Lls+l+e++++Ykqy++q+q v+ sFe + glg+a+pY++ A k + +hF+cLk+ai +q+ XP_023527107.1 182 KSTLLSMLDEIYRKYKQYYQQVQEVMTSFEYISGLGNAAPYANQAIKVMYKHFKCLKNAILDQL 245 789**********************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAEGIESFDH VPQQSRRDKL REHSDHRSTF LPFYDDPSSL ISPPSDSTHR FQFHHHPFFD 60 PQIQSSLLPD IHHQNHCFTS EPLSLSLSSQ PFLAAPIPAA LPLGPFTGYA SILKGSRFLK 120 PAHQLLEELC DVVGLHPAFP SSSSLNSPPS PSPSAFMDDP SSHSPILDHH PLASSHSAPP 180 IKSTLLSMLD EIYRKYKQYY QQVQEVMTSF EYISGLGNAA PYANQAIKVM YKHFKCLKNA 240 ILDQLQFNKK TRGDYGQRSG QNPGFLDHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPS 300 DTDKLMLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIYML ETKQTQKNLH RDDRDPNRLN 360 DHHPTNLLAI DNPSKSAQEI QDTPTKRTRN KPHDVLMGNH DEPLNVSYNV SSHPHVGSNA 420 NMGGNNNGVS LTLGLHQNNN NGIGGGFSEP FPVGFPVAAT RRFGLGIQGN SDGYVMGGHF 480 GRDVVGGQLL HDFVG

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAEGIESFDH VPQQSRRDKL REHSDHRSTF LPFYDDPSSL ISPPSDSTHR FQFHHHPFFD  60
PQIQSSLLPD IHHQNHCFTS EPLSLSLSSQ PFLAAPIPAA LPLGPFTGYA SILKGSRFLK  120
PAHQLLEELC DVVGLHPAFP SSSSLNSPPS PSPSAFMDDP SSHSPILDHH PLASSHSAPP  180
IKSTLLSMLD EIYRKYKQYY QQVQEVMTSF EYISGLGNAA PYANQAIKVM YKHFKCLKNA  240
ILDQLQFNKK TRGDYGQRSG QNPGFLDHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPS  300
DTDKLMLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIYML ETKQTQKNLH RDDRDPNRLN  360
DHHPTNLLAI DNPSKSAQEI QDTPTKRTRN KPHDVLMGNH DEPLNVSYNV SSHPHVGSNA  420
NMGGNNNGVS LTLGLHQNNN NGIGGGFSEP FPVGFPVAAT RRFGLGIQGN SDGYVMGGHF  480
GRDVVGGQLL HDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-80	TALE family protein