PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527149.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 747aa MW: 81252.1 Da PI: 5.1729

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.5	2e-16	461	499	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_023527149.1 461 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 499 589**********************************96 PP
2	TCR	50.1	5.4e-16	546	584	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+Clk+YCeC++ g+ Cs +C+Ce+CkN XP_023527149.1 546 RHKRGCNCKKSNCLKRYCECYQGGVGCSISCRCEGCKNA 584 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MDTPERNQIG TTAAPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS SLPSVFTSPH 60 TSSYKESRFL RRRCYSDLSK PDFSSENGNK GVTGNVDELQ VNSSAPDDKS ESSTKLSSEP 120 QALKSHSSRP DCDRPLPDSD DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT EEKEGTSYDW 180 ESLITEGADI LIFSSPNGSE AIRLVQKPSS TLAQMMENDN ANLSRMRIAD PIESSGGQHE 240 IEFSSSRAGE GCELKDMDQA IDDGISFPIS SDSMSREITD EEVARYIADD CMPVSNLHRG 300 MRRCLDFEAV VNRRKNMEDG SNGCSVSTHP EEKTTSMDKQ LVPYKSGGVV TRYVLTGIGL 360 HLNALATTSK DAKNLNHERF SSERQLNLPN SGGSCHSSST GLDPLSTSIV TEQDMDPSGS 420 GVQSEEDAAM ASAYVLADDF NQNSPRRKRR RLEHAGETEL SCKRCNCKKS KCLKLYCECF 480 AAGVYCIEPC SCQDCFNKPI HEDTVLATRK QIESRNPLAF APKVIRNSDS LPEPGDESNK 540 TPASARHKRG CNCKKSNCLK RYCECYQGGV GCSISCRCEG CKNAFGIKDG SSLLGLETGL 600 EEEETEANQM SVMDKALQGP EIQNNEEQNP GSAIPSTPLQ LPRQLVPLPF SARSNPLRSS 660 FLNVGSSSGF YAGYKHEKPN TTPVSDDAIP NILRGDGSPG AGVKTDSPNS MRISPPQSDF 720 GLSPLPRTGR KLILQSIPSF PSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MDTPERNQIG TTAAPKFEDS PVFNYINNLS PIQPVKSIHT AQTFNSLSFS SLPSVFTSPH  60
TSSYKESRFL RRRCYSDLSK PDFSSENGNK GVTGNVDELQ VNSSAPDDKS ESSTKLSSEP  120
QALKSHSSRP DCDRPLPDSD DRAVSDPCVE NNSGSGSSEA EGNRLVVSQT EEKEGTSYDW  180
ESLITEGADI LIFSSPNGSE AIRLVQKPSS TLAQMMENDN ANLSRMRIAD PIESSGGQHE  240
IEFSSSRAGE GCELKDMDQA IDDGISFPIS SDSMSREITD EEVARYIADD CMPVSNLHRG  300
MRRCLDFEAV VNRRKNMEDG SNGCSVSTHP EEKTTSMDKQ LVPYKSGGVV TRYVLTGIGL  360
HLNALATTSK DAKNLNHERF SSERQLNLPN SGGSCHSSST GLDPLSTSIV TEQDMDPSGS  420
GVQSEEDAAM ASAYVLADDF NQNSPRRKRR RLEHAGETEL SCKRCNCKKS KCLKLYCECF  480
AAGVYCIEPC SCQDCFNKPI HEDTVLATRK QIESRNPLAF APKVIRNSDS LPEPGDESNK  540
TPASARHKRG CNCKKSNCLK RYCECYQGGV GCSISCRCEG CKNAFGIKDG SSLLGLETGL  600
EEEETEANQM SVMDKALQGP EIQNNEEQNP GSAIPSTPLQ LPRQLVPLPF SARSNPLRSS  660
FLNVGSSSGF YAGYKHEKPN TTPVSDDAIP NILRGDGSPG AGVKTDSPNS MRISPPQSDF  720
GLSPLPRTGR KLILQSIPSF PSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	445	452	PRRKRRRL
2	447	451	RKRRR
3	448	452	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-124	CPP family protein