PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527383.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 324aa    MW: 36176.1 Da    PI: 6.5533
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.8e-10555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT +E+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_023527383.1  5 KQKWTNQEETALKAGVVKHGAGKWRTILKDPEfsdvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGAPKQKWTN QEETALKAGV VKHGAGKWRT ILKDPEFSDV LYLRSNVDLK DKWRNMSVMA  60
NGWGSRDKAR LALKRLHAPK KDESIVAQGI AVQSEDEFPE AKTVSLSLDI KQIAGPKQSN  120
VRNEEEDEEE EEKEVERTER DAMYDCHRLD NLIIEAISTL RERSGSIKNS IALYIEDQYW  180
APPDFKRLLS SKLKFLTASG KLVKVKRRYR LAPTVSSCER RGSMLLLDDQ HRASVRDNRD  240
EICTLAKAQM DLELAKMRTM TSEEAAAVAA RAVAEAEAAI AEAEEAAREA EAAEADAAAA  300
QSFAEAAMKT LKGRNLPKMQ MVGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-74MYB_related family protein