PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023527390.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 171aa    MW: 18068 Da    PI: 9.5775
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023527390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.91.3e-392584261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rkn+k 
  XP_023527390.1 25 PQEQLNCPRCKSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 84
                    6899*****************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEAMMHSGSG SGGGGGGGFK AKGRPQEQLN CPRCKSTNTK FCYYNNYSLT QPRYFCKSCR  60
RYWTEGGSLR NIPVGGGSRK NRKPAASVTG SASANHAPPQ PVYQAHDLNL GFPTTTTTAA  120
AAASAGIENG GHGGFGFYIP NLMPYPARDT AVEENPGSNG YWNGMFSGGP W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.24e-37Dof family protein