PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527543.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 744aa MW: 86223.3 Da PI: 5.2001

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.4	8.8e-22	134	218	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ + ++w+v++++leHnH++ XP_023527543.1 134 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTLKEVN-----SRRKETRTGCLAMIRLRLVEYNRWRVDEVKLEHNHSFD 218 69***************************************9888.....8999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MTADDSFSLN DDAFAANPNV DISIEEGCQS SGELLEEEGN NLENDCEQLF RMDDDDLDDR 60 DEKVLLDGHR NHGNDLSISD GNESFDGDIS INADHEHDRD ESPLLDCQID LSRDKNYPSP 120 VAGMEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTLKEVN 180 SRRKETRTGC LAMIRLRLVE YNRWRVDEVK LEHNHSFDPE RAQNSKSHKK MDTTGTKRKV 240 EPTIDVEVRT IKLYRSSALD AMGHEGLNSN GESKAHVYKP RCLLLKKGDA QVIHDFFRRV 300 QLTDPNFFYV MDFYEEGLLR NVLWINSRCR AAYSYFNDVI AFDTTCLSSN FEIPLFAFVG 360 INHHGQSILL GCGLLADETL ETYIWLLRAW LTCMSGRPPH TVITNRCKAL QNAIAEVFPR 420 AHHRLCLSYV MQSILENVGE LQESETFHAV LSRTIYDCVR VEDFEMAWED MIQHFGIKNN 480 EWLRSLYDEK ERWAPVFSKE TFFAGMYNCQ KGDWIIPFFH GYVHQQTSLK EFFDIYELVL 540 LKKQDRETLQ DQESSELSPL LKSRCPFELQ LAKLYTKEIF SKFQDETVMM SSCFSLPQVE 600 TSGGPIMTFV VKERGGEEIP QDGRAYEVMY DKAGGEVRCI CNCFNFKGYL CRHALFILSY 660 NGIDEIPYQY ILSRWRKDLK RVYVPDLGCN NIDITNPVQW FDHLHRRATQ VVQEGMTSQD 720 HYMVAWQALK ESLNKVRLVP DRHV

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MTADDSFSLN DDAFAANPNV DISIEEGCQS SGELLEEEGN NLENDCEQLF RMDDDDLDDR  60
DEKVLLDGHR NHGNDLSISD GNESFDGDIS INADHEHDRD ESPLLDCQID LSRDKNYPSP  120
VAGMEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTLKEVN  180
SRRKETRTGC LAMIRLRLVE YNRWRVDEVK LEHNHSFDPE RAQNSKSHKK MDTTGTKRKV  240
EPTIDVEVRT IKLYRSSALD AMGHEGLNSN GESKAHVYKP RCLLLKKGDA QVIHDFFRRV  300
QLTDPNFFYV MDFYEEGLLR NVLWINSRCR AAYSYFNDVI AFDTTCLSSN FEIPLFAFVG  360
INHHGQSILL GCGLLADETL ETYIWLLRAW LTCMSGRPPH TVITNRCKAL QNAIAEVFPR  420
AHHRLCLSYV MQSILENVGE LQESETFHAV LSRTIYDCVR VEDFEMAWED MIQHFGIKNN  480
EWLRSLYDEK ERWAPVFSKE TFFAGMYNCQ KGDWIIPFFH GYVHQQTSLK EFFDIYELVL  540
LKKQDRETLQ DQESSELSPL LKSRCPFELQ LAKLYTKEIF SKFQDETVMM SSCFSLPQVE  600
TSGGPIMTFV VKERGGEEIP QDGRAYEVMY DKAGGEVRCI CNCFNFKGYL CRHALFILSY  660
NGIDEIPYQY ILSRWRKDLK RVYVPDLGCN NIDITNPVQW FDHLHRRATQ VVQEGMTSQD  720
HYMVAWQALK ESLNKVRLVP DRHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein