PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023527557.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 698aa MW: 78517.6 Da PI: 4.7607

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023527557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	522	559	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s Lek+++++ +Lq XP_023527557.1 522 RQLIQDRIKELRQMVPNgA------KCSIDGLLEKTIKHMLYLQ 559 67799**********66......999999*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
METSALNQLL RSLCSNSQWI YAVFWKIKYH SSTILTWEDG YCNYSELENH MGRATDYGMI 60 KDRDEHVSSY YGDSGNCSVD AAVADMFCRQ YALGEGTVGS VANSGNHSWV FLENIFTSDL 120 TSASIYEGPT EWLIQYASGI KTILLVPVLP FGVLQLGSLQ MVTENLSVVA SIKDRFSAIN 180 FIDGNATSIA PHKGAWPLCA SVVPSPFESL DEQANFTTYM MEAQNHGAIE NIKPPVPTLN 240 PSVTIQDELT VTRRIRLETL HGEGDMLRIN MEASFAPLYQ SIKAGELEFS DLFSLESLLP 300 PCSRLRNDET GLIESTPRIV NSYPVDNVVE QQSGQNLVTK KEYGTADSLF SFPDDCELQK 360 AFGPAFFAQK HTTDFSYDLS STINDTTSSV LSSRDFKEGD IELLLEAMMP AFPNSVDTFS 420 NNTINGRIAP VVRNSSLSAK TCESESSAMV MDDPALWIFP ESTATEIGRK TLTSLSTSNS 480 TVINELEEND RDITRHRKGM KRFNCSPEIK VTSKTRQRPR DRQLIQDRIK ELRQMVPNGA 540 KCSIDGLLEK TIKHMLYLQR VTDQAEKLKQ LAQQEEGFDS EYCTDLENES FQSNGTSWTR 600 AFDIGSELQV CPIVVEDLEY HGHMLIKMLC NDTELFLEIA QIIRNLELTI LKGVVERHSN 660 NSWAHFVVEA PRGFHRMDVF WPLMHLLQRQ RNPISCRI

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

METSALNQLL RSLCSNSQWI YAVFWKIKYH SSTILTWEDG YCNYSELENH MGRATDYGMI  60
KDRDEHVSSY YGDSGNCSVD AAVADMFCRQ YALGEGTVGS VANSGNHSWV FLENIFTSDL  120
TSASIYEGPT EWLIQYASGI KTILLVPVLP FGVLQLGSLQ MVTENLSVVA SIKDRFSAIN  180
FIDGNATSIA PHKGAWPLCA SVVPSPFESL DEQANFTTYM MEAQNHGAIE NIKPPVPTLN  240
PSVTIQDELT VTRRIRLETL HGEGDMLRIN MEASFAPLYQ SIKAGELEFS DLFSLESLLP  300
PCSRLRNDET GLIESTPRIV NSYPVDNVVE QQSGQNLVTK KEYGTADSLF SFPDDCELQK  360
AFGPAFFAQK HTTDFSYDLS STINDTTSSV LSSRDFKEGD IELLLEAMMP AFPNSVDTFS  420
NNTINGRIAP VVRNSSLSAK TCESESSAMV MDDPALWIFP ESTATEIGRK TLTSLSTSNS  480
TVINELEEND RDITRHRKGM KRFNCSPEIK VTSKTRQRPR DRQLIQDRIK ELRQMVPNGA  540
KCSIDGLLEK TIKHMLYLQR VTDQAEKLKQ LAQQEEGFDS EYCTDLENES FQSNGTSWTR  600
AFDIGSELQV CPIVVEDLEY HGHMLIKMLC NDTELFLEIA QIIRNLELTI LKGVVERHSN  660
NSWAHFVVEA PRGFHRMDVF WPLMHLLQRQ RNPISCRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-44	bHLH family protein