PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528036.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 160aa    MW: 18010.3 Da    PI: 11.307
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-1990138153
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     ++y+GVr++k +g+W+AeIrd + +   r+r++lg++ taeeA +a++  r+++
  XP_023528036.1  90 CRYRGVRQRK-WGKWAAEIRDpF-K---RARIWLGTYNTAEEASRAYESKRLEF 138
                     78*******9.**********55.3...5********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MSRKLRVICN DPDGTDSSSS ENERDEAKSS KSKRIVREIH FPVFPSRSSK SIDDEASQSS  60
ARGGSNGGKA HQRRNIRVLS KTLPTGRTAC RYRGVRQRKW GKWAAEIRDP FKRARIWLGT  120
YNTAEEASRA YESKRLEFQA AMAAAPKAPP RFKASHLLGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.19e-30ERF family protein