PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528051.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 253aa    MW: 27744.4 Da    PI: 7.0067
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528051.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003394116123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023528051.1  94 FSCNYCQRKFFSSQALGGHQNAH 116
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MKPFLDLQKE PSCLANDSDI SSQGGSICCG SRTPPPSPSP SPSTHPGFES VCLDLTLNFN  60
IVEDIGTRPD STRFSLSSTS DQSSNEPTAV PRVFSCNYCQ RKFFSSQALG GHQNAHKRER  120
TMAKRAMRMG ILAERYASLA SLPLKGSSFK SLGIKAHSSL LHGMTAPMMP IDIRSSARFE  180
PEPGYIGMPI FLEDDEADIM WPGSFRAMAE TRNTRELTQP SFRLTDLSSI SSVEKTSIQD  240
VEKNSTLDLT LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.14e-40C2H2 family protein