PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528063.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 244aa MW: 27674.2 Da PI: 7.099

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.2	1.8e-54	3	128	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + +++ +i evd++k+ePwdLp ++k ++kewyfF+ d+ky++g r+nrat++gyWkatgkdke+++ XP_023528063.1 3 LPPGFRFHPTDEELITHYLSPKVLSASFSS-PAIGEVDLNKCEPWDLPGRAKMGDKEWYFFCVIDRKYPRGLRTNRATQAGYWKATGKDKEIFK- 95 79***********************999.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfykgrap+g++++Wvmheyrl XP_023528063.1 96 GRTLVGMKKTLVFYKGRAPRGHNSNWVMHEYRL 128 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MELPPGFRFH PTDEELITHY LSPKVLSASF SSPAIGEVDL NKCEPWDLPG RAKMGDKEWY 60 FFCVIDRKYP RGLRTNRATQ AGYWKATGKD KEIFKGRTLV GMKKTLVFYK GRAPRGHNSN 120 WVMHEYRLHS KSSVYSLLPG NSSQKEWVIC RVFKKSGSSV GKGEMAVSCS SSVLPPLTES 180 DASQVTCFSN SMEEDQNEEG EFWVGLLEEP QNEGRFWRLE VTSSANHVSY PSPPDDALDS 240 LWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	2e-90	NAC family protein