PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528222.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 280aa    MW: 31055.6 Da    PI: 6.9557
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.4e-10190233755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_023528222.1 190 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 233
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MALANSSVHE ADGMDKAGGY IKSIPIATHD TPNATFLFRN TTNYQLDHHQ QQQQLPQSLI  60
NFKCGIDNIF HKNNESLLSF EPQGVGQDTY NWDDHQRLME DPNCFQTATN GYSSPKENKN  120
GDGSVYDWLY SEASGVSDAI QEAEGAHEIA NQKRPHMGES SGSVSKKQCT TVAAKKQKPK  180
SSTAKDPQSI AAKNRRERIS ERLKILQELV PNGSKVDLVT MLEKAISYVK FLQLQVKILA  240
TDEFWPVQGG KAPDISQVKE AIDAILSSQR ERSSSSNSQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.11e-61bHLH family protein