PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528352.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 201aa MW: 22006.2 Da PI: 8.5186

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.6	8e-07	52	90	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R+++ ++f+ L++l+P++ s+K + +i+ +++++I +Lq XP_023528352.1 52 RKEMSESFDVLQSLVPNL----SPKATRETIVSETIQFIEDLQ 90 99*************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MEACTDSVVS LLPHILPVHQ SEAAENKAST SRKRRRALEA NGGVQRKGRE KRKEMSESFD 60 VLQSLVPNLS PKATRETIVS ETIQFIEDLQ KQLTRLEMEK KPLESVTMLP STNSDSPGGG 120 DGGVIVSVSS NIVLFGIIFA SVRRGMVTQI LMAFERHQAE VLAANVAVSH GNLTLTVTAS 180 IHGYVENTIE QIRNDILSLK K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	36	RKRRR
2	46	54	RKGREKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	2e-09	bHLH family protein