PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528442.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 221aa    MW: 24445.3 Da    PI: 4.9325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-1879130256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_023528442.1  79 PYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRGA 130
                     59*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MDYAGFFSSV SDFSSEASFG SPESCNFLPF NENDSEEMLL FGLISEGTRE SSDPSIGAVR  60
VKEEEVDSVG EDTRKKERPY RGVRRRPWGK FAAEIRDSTR HGIRVWLGTF DSAEAAALAY  120
DQAAFSMRGA AAILNFPVDR VRESLKEMNF GGGEAADSIT DVGGSPVIAL KRKHSIRRKA  180
ISKKNKERDL RIQNVMVLED LGAEYLEELL GSSQNSIPCS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-64ERF family protein