PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528728.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 303aa    MW: 33211.6 Da    PI: 5.9429
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_023528728.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAAMAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MATSKASDKA YPVHEIAQTQ MGFALIQRNS SQISQTGGER RGRRKQGEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAHEAAMA YDRAALSMKG TQARTNFIYS DTSTFHSLLT  120
AFDAQSLLPN SALSHSKMVT PNPNKNNKNN NIPFTQSLPS NPCFENLDTN FLFSNDSNSG  180
YLSCIVPDNC LKPPSDSTTS NDLQKLSFFA SNSIDSQGLD GSAMAYNSSN DGVWDEQQIW  240
MSNGDELSAI INSSSSSSSM VAENGDFHPF MNSSYGGLLP QSSTCSTYAP PLGDVFDFGY  300
PLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-54ERF family protein