PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528732.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 215aa MW: 24391.5 Da PI: 10.2169

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W+t + + g+ R++k+c++rw +yl XP_023528732.1 14 KGPWTPEEDHKLLAYIQQHGHGSWRTLPPKAGLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ E++ +v+++++lG++ W++Ia +++ +Rt++++k++w++++ XP_023528732.1 67 RGKFSLHEEQAIVQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHM 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MGTSPRRHKS GLKKGPWTPE EDHKLLAYIQ QHGHGSWRTL PPKAGLERCG KSCRLRWTNY 60 LRPDIKRGKF SLHEEQAIVQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HMKKKLIKMG 120 IDPITHKPIK NNEEQNNMNS TLTHMAQWET ARLEAEERLA RQSKLQPIPS ANQNPYGSSG 180 GEESPTTSST AAGGDQLPSS DSKNNWWDTI LGGEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	3e-84	MYB family protein