PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528741.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 344aa MW: 39621.8 Da PI: 4.1201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.4	4.8e-22	7	135	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 p G+ F Ptdeel+ +yL +k+ g+ ++ ++ +diy++eP + ++ e+k++yfF++ +kk+++ rk ++ g+W+ k ++v+s+ XP_023528741.1 7 PFGYDFAPTDEELLIYYLFHKIVGDIVPS-ISLPVIDIYSHEPAMIWqQCGGMEDKDIYFFTTLKKKKSRIIRKVG-INGGTWSGESKGHKVFSS 99 88*********************9998.67**********73555668899***999876665555.579********998 PP NAM 96 .kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +g+ k + + g + + ++W+mhey+l XP_023528741.1 100 aNNAPIGTIKRFHYEtsGGVNANDDDCSWIMHEYTL 135 67888****995445777779*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MDSSMFPFGY DFAPTDEELL IYYLFHKIVG DIVPSISLPV IDIYSHEPAM IWQQCGGMED 60 KDIYFFTTLK KKKSRIIRKV GINGGTWSGE SKGHKVFSSA NNAPIGTIKR FHYETSGGVN 120 ANDDDCSWIM HEYTLDPTVL TNGFVHDSYV VCLIRKRILK KVRNTVSSTI QAPFVFNGPT 180 TTQTDALYMD GVNKCPAQMI ESQDDIIFAN ELEEQLEELN PEHSDNIMFA NELENQLEEL 240 DAEHSDDIMF ANEPENQLEE LNAEHSDDIM FATEIENQLE ELDAEHYDDI MLANNFENQR 300 EELNAEHYDI EKDSSKDFEW VRELKVAKNS EDNREGWERD QNEL

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MDSSMFPFGY DFAPTDEELL IYYLFHKIVG DIVPSISLPV IDIYSHEPAM IWQQCGGMED  60
KDIYFFTTLK KKKSRIIRKV GINGGTWSGE SKGHKVFSSA NNAPIGTIKR FHYETSGGVN  120
ANDDDCSWIM HEYTLDPTVL TNGFVHDSYV VCLIRKRILK KVRNTVSSTI QAPFVFNGPT  180
TTQTDALYMD GVNKCPAQMI ESQDDIIFAN ELEEQLEELN PEHSDNIMFA NELENQLEEL  240
DAEHSDDIMF ANEPENQLEE LNAEHSDDIM FATEIENQLE ELDAEHYDDI MLANNFENQR  300
EELNAEHYDI EKDSSKDFEW VRELKVAKNS EDNREGWERD QNEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-16	NAC family protein