PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528801.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 210aa    MW: 23367.3 Da    PI: 6.2838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.72.8e-133887256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     ykGVr++  +g+Wv+e+r p  n k+ +f++g+f ++e+Aa a++  ++ ++ge
  XP_023528801.1 38 IYKGVRQR--NGKWVSELRWP--N-KNSTFWVGTFCSPEMAAVAYDVVALTIKGE 87
                    69***975..6******6665..3.37*********************9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MPSSSSSSTN EHLPPSQKTA STKRKAGRKK FQETRHPIYK GVRQRNGKWV SELRWPNKNS  60
TFWVGTFCSP EMAAVAYDVV ALTIKGESAP LNFPNWTHLF PRVTSSSSSI NDIRTMAVEA  120
AEAFTSSNRL SSLSSSSLCS SLTSEEKVTP KVLTDRLVLD EEEVFNMPAI IADMAEGLIL  180
TPPGMKKGFN WEEYEDTVEL SLWNDDGEKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-41ERF family protein