PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528921.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 233aa    MW: 26252.9 Da    PI: 9.475
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.58e-30181371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF+Ptdeelv +yLk+kv g +l++ +vi+e++++ ++Pw Lp  +   +++ +fFsk+++      r    +  g+Wk+ gk+k ++++
  XP_023528921.1  18 LPVGYRFSPTDEELVEHYLKRKVFGLPLPA-SVIPEFNVFLTDPWGLPGDL---KEKRFFFSKQKSFL----RM--NAGCGIWKSIGKEKFIITQ 102
                     799***************************.99***************544...45679998876654....33..4578*************98 PP

             NAM  96 .kgelvglkktLvfykgrapk.gektdWvmheyrl 128
                       ++l gl+k+Lvf + + p+ ++ t+Wvmheyrl
  XP_023528921.1 103 gINQLFGLRKSLVFSESKFPErTRTTRWVMHEYRL 137
                     55677**********887665156789******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MFPMENTSNF VFDGGIRLPV GYRFSPTDEE LVEHYLKRKV FGLPLPASVI PEFNVFLTDP  60
WGLPGDLKEK RFFFSKQKSF LRMNAGCGIW KSIGKEKFII TQGINQLFGL RKSLVFSESK  120
FPERTRTTRW VMHEYRLARS AATSNSTQIE VGDWAVYCLF QKRRKHKRKG VKENQRVAAA  180
QGSILDLTVE DSWEFPQPCA SCSSGVTQVS SNGTGSTDQE ETSGGLDLGL GFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163169RRKHKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-41NAC family protein