PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023528971.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 235aa    MW: 26204.6 Da    PI: 6.1078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023528971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-193584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_023528971.1 35 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 84
                    678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDFKNSNTNS PSPSKPRRKH HDQHSQHPHP QEPTRFLGVR RRPWGRYAAE IRDPSTKERH  60
WLGTFDTAEE AALAYDRAAR SMRGSKARTN FVYSDMPHGS SVTTIISPDD SQLFPPTPTP  120
TPTSLPQTQP NHLCFTLHDD PFTATSFPGN DWLPDTDSYQ PVTAFMDTGI PHHNAELPPL  180
PPDASSSYND CATMIDWSSS SSSSFIGFDS NTPLPPFPDT NNDAFGFGSS SNYFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.19e-33ERF family protein