PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529040.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 150aa MW: 16526.1 Da PI: 8.9467

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00012	39	77	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R d++ ++ L++l+ + +K + a++L +A+eYI+ L XP_023529040.1 39 ERKDKLGERVLALQQLVSPY-----GKTDTASVLLEAMEYIQFL 77 56677777777888888887.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
MEVETMMEHK RSLCSVDESS LTSLTSKRHK TGFSISSKER KDKLGERVLA LQQLVSPYGK 60 TDTASVLLEA MEYIQFLHKQ VKVLSAPYLQ STPTAQLQEK EPCSHSLRSR GLCLVPISCI 120 AGVASSNGAD IWAPVKTISP KFKNAISPFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	1e-63	bHLH family protein