PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529104.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 181aa    MW: 19475.6 Da    PI: 5.2424
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-17958255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r++  +g+Wv+eIr+p+    +  r++lg+f tae+Aa a++ a+++l+g
  XP_023529104.1  9 IYKGIRQRT-TGKWVSEIREPR----KpNRIWLGTFPTAEMAAVAYDVAALALKG 58
                    69****999.9*********94....478***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSSSGRHPIY KGIRQRTTGK WVSEIREPRK PNRIWLGTFP TAEMAAVAYD VAALALKGQD  60
AELNFPNSAA SLPVPASRSA SDIQAAAASA AAALGAAAAA MEARNNNGRG RSNFSATNSA  120
YGTRYNENEL GNQFVDEDLI FDMPNVLMNM AEGMLLSPPR FNVHGNDDRD DGGDQTLWNF  180
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-45ERF family protein