PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529229.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 430aa MW: 47258.6 Da PI: 4.6892

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.7e-10	233	280	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_023529229.1 233 SHSLAERARREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 280 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MNRALPEMLN TAENCADTLT VLERQRARFK WQQDQLLYQQ QQQQQQPFNG MMDYGAGFPP 60 SDHLTGFPGF MSAAGDGGGG GGLSLVEMVM GAVKPDPGLE DGWSDPSLLL NPPTAYELNS 120 SLSRTSSCPP AVNPAAAAGR ESFKKRKAEK VQKPINNKEK KIKASSEEEE EEEEEEELSK 180 TTDQNSTKNN NSTTTTTTTN NNRETSADTS KASEVKKPDY IHVRARRGQA TDSHSLAERA 240 RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ RQVEFLSMKL AAVNPRLDFN 300 VDDLFLKEVF PPPCTTATFA AIGGISSEIT DPSSYLQFNP NNQQIVPCCG LEMGINTSDV 360 ALRRTISAPV SFPENFLDSS CLTQFQGSSG WDVDLQNLYN VGFDQGRSSN AFSSQPYTGS 420 IEGSNVKMEL

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MNRALPEMLN TAENCADTLT VLERQRARFK WQQDQLLYQQ QQQQQQPFNG MMDYGAGFPP  60
SDHLTGFPGF MSAAGDGGGG GGLSLVEMVM GAVKPDPGLE DGWSDPSLLL NPPTAYELNS  120
SLSRTSSCPP AVNPAAAAGR ESFKKRKAEK VQKPINNKEK KIKASSEEEE EEEEEEELSK  180
TTDQNSTKNN NSTTTTTTTN NNRETSADTS KASEVKKPDY IHVRARRGQA TDSHSLAERA  240
RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ RQVEFLSMKL AAVNPRLDFN  300
VDDLFLKEVF PPPCTTATFA AIGGISSEIT DPSSYLQFNP NNQQIVPCCG LEMGINTSDV  360
ALRRTISAPV SFPENFLDSS CLTQFQGSSG WDVDLQNLYN VGFDQGRSSN AFSSQPYTGS  420
IEGSNVKMEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	4e-62	bHLH family protein