PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529301.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 291aa MW: 33507.8 Da PI: 5.9275

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.4e-09	220	253	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps++++ LA+++gL+ +q+ +WF N+R ++ XP_023529301.1 220 WPYPSESQKVALAESTGLDLKQINNWFINQRKRH 253 69*****************************885 PP
2	ELK	34.3	5.2e-12	173	194	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyL sLkqEF+ XP_023529301.1 173 ELKGQLLRKYSGYLDSLKQEFL 194 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDRGLIMFDH NNNDDDNNND SDSNNKKMFL PYNDHGQSCR AKLMAHPLFP RLLASYVNCQ 60 KVGAPPDVVA RLEQACTVAA GNCRTVGRGD DPGLDQFMEA YCEMLSKYEQ ELTKPFKEAM 120 VFFSRIESQL KALAASSSSS DGYELVGQNE CSKEIEVVDM NENYIDPQAE EKELKGQLLR 180 KYSGYLDSLK QEFLKKKKNG KLPKEARQQL LDWWSRHYKW PYPSESQKVA LAESTGLDLK 240 QINNWFINQR KRHWKPSEDM QFVVMDAAHP HYYLDNLICN PFSMDCSSTL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-111	TALE family protein