PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529435.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 576aa MW: 62352.1 Da PI: 7.4318

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.1	4.1e-14	118	157	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C N+ e+ XP_023529435.1 118 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCANCYNNVEN 157 89************************.******9875 PP
2	TCR	49.4	8.8e-16	203	241	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + kgC+Ckks+ClkkYCeCf+a+ Cse+CkC dCkN e XP_023529435.1 203 HYKGCHCKKSSCLKKYCECFQANILCSENCKCMDCKNFE 241 789**********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MDDLPPPNAQ TGSEEPDSVV AFDVTAKKLA RQLNFTEFGG AVLPELPHFQ SQSHSQSRCQ 60 SESPAVMVVQ SPSQPKSPQH LMVLPVGTQS PHPVAVRKPD SPKSRSRSVE TKDATPKKQK 120 QCNCKHSRCL KLYCECFASG IYCDGCNCAN CYNNVENEVS RREAVETTLE RNPNAFRPKI 180 ASSPHGPRES RDEIGEVVML GKHYKGCHCK KSSCLKKYCE CFQANILCSE NCKCMDCKNF 240 EGSDERQALL HGDHVNNMAY IQQAANAAIT GAIGSSGYAC LSTSKKRKGP ELCFGPTGKD 300 APCNSIAQFH QANNMLSSGA STSSPLPVAH VGSPAAPGPS KFSFRSLLAD LIQMNDLKEL 360 CSVLVVLSSE ASNNIAEQRI AEKQINDPLQ ISRASTGDRS QDQEADAKAA DVECGSLNQG 420 DRIVHHNSNS DGSDTTRARS MSPGTLALMC DEKDTMFTGA ALAHGLAGHG CNTSSHMLDK 480 SVSEVYIEQE RIVLTKFRDC LNKLITPGEI KETNSVEARN ENHSKNSTSN SGYRQRIISH 540 GVVKDVALSA PRIPPIDAAA HHTSNKMLPL PENGKE

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MDDLPPPNAQ TGSEEPDSVV AFDVTAKKLA RQLNFTEFGG AVLPELPHFQ SQSHSQSRCQ  60
SESPAVMVVQ SPSQPKSPQH LMVLPVGTQS PHPVAVRKPD SPKSRSRSVE TKDATPKKQK  120
QCNCKHSRCL KLYCECFASG IYCDGCNCAN CYNNVENEVS RREAVETTLE RNPNAFRPKI  180
ASSPHGPRES RDEIGEVVML GKHYKGCHCK KSSCLKKYCE CFQANILCSE NCKCMDCKNF  240
EGSDERQALL HGDHVNNMAY IQQAANAAIT GAIGSSGYAC LSTSKKRKGP ELCFGPTGKD  300
APCNSIAQFH QANNMLSSGA STSSPLPVAH VGSPAAPGPS KFSFRSLLAD LIQMNDLKEL  360
CSVLVVLSSE ASNNIAEQRI AEKQINDPLQ ISRASTGDRS QDQEADAKAA DVECGSLNQG  420
DRIVHHNSNS DGSDTTRARS MSPGTLALMC DEKDTMFTGA ALAHGLAGHG CNTSSHMLDK  480
SVSEVYIEQE RIVLTKFRDC LNKLITPGEI KETNSVEARN ENHSKNSTSN SGYRQRIISH  540
GVVKDVALSA PRIPPIDAAA HHTSNKMLPL PENGKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-162	CPP family protein