PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529773.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 259aa MW: 30059.5 Da PI: 9.5173

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.6	2.6e-45	32	158	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+ +yLk+ v+gkkl++ + i ++++y ++Pw+Lp ++++e+ewyfF++rd++ g r+nr+t++gyWkatg+d+++++ XP_023529773.1 32 PGFRFHPTEEELLEFYLKHVVSGKKLQF-DPIGTLNLYLHDPWELPGLARNGEREWYFFVPRDRRLGGGGRPNRTTRNGYWKATGSDRKIVRIsd 125 9************************9.99***********8888999*********************************98766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvgl+ktLvfy gra++g+ktdW+m+eyr+ XP_023529773.1 126 PKRLVGLRKTLVFYLGRASRGSKTDWIMNEYRF 158 7788*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MALFIPRQKK TLTGGVPTRT LSPEMTQEAD LPGFRFHPTE EELLEFYLKH VVSGKKLQFD 60 PIGTLNLYLH DPWELPGLAR NGEREWYFFV PRDRRLGGGG RPNRTTRNGY WKATGSDRKI 120 VRISDPKRLV GLRKTLVFYL GRASRGSKTD WIMNEYRFPD NSPLSKDMVL CKIYRKATSL 180 KVLEQRAAME EEDARLFQAS LQIPSELDNL TEPQVPNLNM DWSQDLVWTQ FCSPWLQTLT 240 PSASLLNFQC FHRELGYLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-76	NAC family protein