PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529970.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 256aa MW: 29264.1 Da PI: 6.5124

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.6	7e-55	15	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++ + +i+evd++k+ePwdLp k+k +ekewyfF+ rd+ky++g r+nratk+gyWkatgkd+e+++ XP_023529970.1 15 LPPGFRFHPTDEELITHYLSQKVVSSGFCS-PAIAEVDLNKCEPWDLPGKAKMGEKEWYFFCVRDRKYPSGLRTNRATKAGYWKATGKDREIFK- 107 79***********************877.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ lvg kktLvfykgrap+g+k++Wvmheyrl XP_023529970.1 108 GRCLVGFKKTLVFYKGRAPRGQKSNWVMHEYRL 140 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVSS GFCSPAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFFCVRDRK YPSGLRTNRA TKAGYWKATG KDREIFKGRC LVGFKKTLVF 120 YKGRAPRGQK SNWVMHEYRL HAQSSAFSQK EWVICRVLKK RSGKKGEETG MSSTVLPPLM 180 ESEASLVTCF SNSMEDGTEL LDKFWSGHFE EEEEDGGGEV WRLKVGSSKG FEEPFGFGAN 240 HHPSPPLDDV HCLWNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	2e-89	NAC family protein