PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530120.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 290aa    MW: 33440.3 Da    PI: 9.1894
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.21.5e-18131220198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp +f+++h   ++e+ +++l de+g++++ k+  +k++    l++GW++F+ +++L +gD +vF+l++ +ef  +v 
  XP_023530120.1 131 FVKPMLQSHVTGGFWLGLPVQFCKQHL--PREDEMVILLDEDGNEFQTKYLAEKTG----LSGGWRGFAIDHQLVDGDALVFHLTKPTEF--KVY 217
                     89*********************9995..345669***************555555....***********************9876666..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023530120.1 218 IIR 220
                     887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MVESNLTYEE CRRQRLEENK KRMEELNLNK LADALKSSST KSSPTKQLKR PRQPHDISSF  60
SVRRSSRFAD KPPPNYKEVP IEPLPGNRSY KRTYQRRDLL NRVYASHEER QYAIDRARDL  120
QSSLDSRYPS FVKPMLQSHV TGGFWLGLPV QFCKQHLPRE DEMVILLDED GNEFQTKYLA  180
EKTGLSGGWR GFAIDHQLVD GDALVFHLTK PTEFKVYIIR AYNLEDKEDT NEDSDDTQSE  240
KSGQRSTRSS GHKIMANNSE DKSDKCEDSE VSQLEKSGKR STRSASKGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-82B3 family protein