PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530126.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 257aa    MW: 28094.4 Da    PI: 8.9777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.5e-21110159255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ k++g
  XP_023530126.1 110 NYRGVRQRP-WGKWAAEIRDPK----RaARVWLGTFNTAEEAARAYDEAAIKFRG 159
                     59*******.**********83....57*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MLMASHHHSA AFPRLTDEQE GLVIVDALTQ VVSGAAAAGL EFRHDHFLRL LHPPSTIFPP  60
SSDFDTCHIC RISGCLGCNF FSTPSSHQPT TTTTDKNNNS GRRVRRLKKN YRGVRQRPWG  120
KWAAEIRDPK RAARVWLGTF NTAEEAARAY DEAAIKFRGP RARLNFPSSD NSLTTFNYSP  180
PAASTTTSTS ATVTAAPATA TAAAATSNLN RNEAAVAPRT PSSMMEIQNN VVLAEIFEDD  240
DDIKSLIMDF AGQSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-34ERF family protein