PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530276.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 297aa    MW: 32536.3 Da    PI: 7.7489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.4e-1386137155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r +h  +Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  XP_023530276.1  86 QRITHITVERNRRKQMNEYLSVLRSLMPHS---YLQRGDQASIIGGAIDFVKQLE 137
                     799***************************...9*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MALEAVVFHQ HPFGNNDDDN NNNDLFNLVS SSAPFTFTHD EQHQDLYFLT NQTLNGGGGG  60
GGSGRPARRR RGGGRTQKNK EEIENQRITH ITVERNRRKQ MNEYLSVLRS LMPHSYLQRG  120
DQASIIGGAI DFVKQLEHQV HLLTSAQTYV NPCFPPQNAP ISHFFTCPHL SSAAAAAAAA  180
AASSSSSSSS SSSSSSSPMS SNQIHSPIAH VHVSMADSHA NLKIRCTKFP KQLLKIVSAL  240
HSLRLSVLHL NLSTAHQTVL YSFSLKVEED CGLSSEDEIA RAVYQLLCRI QEEAFSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.11e-58bHLH family protein