PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530722.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 272aa MW: 31076.3 Da PI: 9.3421

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.9	7.3e-15	19	109	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt + + +L+ a e++ +l+rg+l+ ++W+ev++++ +er+ r+++qCk++++ l+++yk +k++ ++ + +s +p+f+ l+ XP_023530722.1 19 CWTLDDTSTLVYAWGERHLDLNRGSLRYKHWQEVADAVnschnHERKSIRTAIQCKNRIDTLKRKYKIEKARIQESGGTYVSAWPFFSCLD 109 7********************************************************************99998889999***9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MALSQPSPSA STFPVREDCW TLDDTSTLVY AWGERHLDLN RGSLRYKHWQ EVADAVNSCH 60 NHERKSIRTA IQCKNRIDTL KRKYKIEKAR IQESGGTYVS AWPFFSCLDS LIGGNSHKSS 120 TPAAVSYCKA LTATTPGLSL FPKIPVGPRS GTKKRRLSHV YGSFCNSHLS QDLNSKHDEG 180 KDGMYSENHF SSPRFKDRDV GYRKLADAIG TIADIFERVE VAKQRHMVEL EMQRMQFVKD 240 LEYQRMQLLM EMHLQMQKIK CSRRDSGADC YS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-53	Trihelix family protein