PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530728.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 301aa    MW: 34269.4 Da    PI: 8.4363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.34.3e-5551311129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL++k+++++++  +vi+ vd++k ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++  
  XP_023530728.1   5 LPPGFRFHPTDEELISYYLTQKISDSSFTS-KVIAVVDLNKNEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFG- 97 
                     79*************************999.99***************999999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +g+lvg+kktLvfykgrap+gek++Wvmheyrle
  XP_023530728.1  98 GGALVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131
                     ********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDDNLPPGFR FHPTDEELIS YYLTQKISDS SFTSKVIAVV DLNKNEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFGGGA LVGMKKTLVF YKGRAPRGEK  120
SNWVMHEYRL ENNHFFKPSK EEWVVCRVFK KQNPPKKAQQ STSSQPCLSS PCDTNSIVNE  180
FGDIELSNFS NNISAQAYET NNMNMNMNWG APMNDQTASI TTLPSLSSWP PNPNLLTSNL  240
SMNSLLLKAL QLRTMNHSQF GTNHLSFQAS SSSSKVFESP QQQQQPQQQQ QEQPLNLDSL  300
W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-98NAC family protein