PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530977.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 178aa    MW: 20114.4 Da    PI: 11.5338
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530977.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.5e-162270355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +grWvAeI++ s+   + r +lg+f+ +e+Aa a+++a++ l+g
  XP_023530977.1 22 FLGVRQRP-SGRWVAEIKVSSQ---NLRLWLGTFDRPEDAAMAYDRAARLLRG 70
                    67******.7*********543...5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MAATHTSNSP VQQQISHGRR RFLGVRQRPS GRWVAEIKVS SQNLRLWLGT FDRPEDAAMA  60
YDRAARLLRG RTAKTNFPCE QQQPSYSLFG HTPKLHRLIQ HAIIKNRARV RSSTALDHQP  120
SRNNNHNNNN HNNNGFIDSV VEDTIFCCSS TNRFGSSKVH NSVFVAPSFS SRSDAESM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-22ERF family protein