PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531024.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 237aa    MW: 26883.9 Da    PI: 8.4119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.3e-124688754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+++I++L
  XP_023531024.1 46 VSERNRRRKLNDRLFALRAVVPNiS------KMDKASIIKDAIDHIQKL 88
                    57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNYLENGVYM PEDLGSWGLD DLVPSYYDSS SPEGVLSPSA ASKNIVSERN RRRKLNDRLF  60
ALRAVVPNIS KMDKASIIKD AIDHIQKLRE QERRIETEIY ELESGKSKKK IARYEFEQEV  120
PLLHTPKRNK TDQFSYYDSS ATRYSPIEVL DLSVTYMGER TIVVSLTCCK RADSMVKLCK  180
VFESLKLKII TANITAVSGR LLKTVFIEAG QEERDLLKIK IETALAGLND PQSPVSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-78bHLH family protein