PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531058.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 261aa    MW: 29432.4 Da    PI: 7.9317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.5e-08155202455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023531058.1 155 SHSLAERVRRGKINERLRCLKDIVPGC----YKTMGMAVMLDEIINYVQSLQ 202
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDPELQSFKP SFSFPDFTDP NFELMGHYSA SNPVVLDNPS LNFTNLLPFS NDMFIPHHQT  60
PPQFPQNLGD CNSFQIMQQP PPDPPVCAEI HEMKKRKPMD VSESSSGIST SETGLFNAKN  120
RSGKGKRLKS IEKEEEKSRR EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLKDIVPG  180
CYKTMGMAVM LDEIINYVQS LQNQVEFLSM KLAAASSFND FNSKADALSK LQARAHEARE  240
LERLMREGYG GVACFHSTLP L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.28e-56bHLH family protein